BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A10LP1|AL428483
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1742 1732 0.0
>3x_Contig1742
Length = 17167
Score = 1732 bits (873), Expect = 0.0
Identities = 888/891 (99%), Gaps = 2/891 (0%)
Strand = Plus / Plus
Query: 1 ccgaattcgttggatcttgacgtcgaagtggattggttatataaggggaagaagaaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5318 ccgaattcgttggatcttgacgtcgaagtggattggttatataaggggaagaagaaggtc 5377
Query: 61 agagcgaataggagattggactcctcttcagctccaccggctactccctctgctcctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5378 agagcgaataggagattggactcctcttcagctccaccggctactccctctgctcctgct 5437
Query: 121 cctgcttccacttctgttcctactcctgctcctgggtctgctggtgttgcagaagcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5438 cctgcttccacttctgttcctactcctgctcctgggtctgctggtgttgcagaagcaaca 5497
Query: 181 ccaggggctggcactgacggtgctggaccagagaactctgcaagttcagaacctgctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5498 ccaggggctggcactgacggtgctggaccagagaactctgcaagttcagaacctgctcaa 5557
Query: 241 actccaactcccgcggcaaagactcgtaatcggtcaagctcacactcgcaagcgagtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5558 actccaactcccgcggcaaagactcgtaatcggtcaagctcacactcgcaagcgagtctg 5617
Query: 301 agccagactgcagctaactctccaaatacgtctggtcgctctttgaaaccatcatctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5618 agccagactgcagctaactctccaaatacgtctggtcgctctttgaaaccatcatctgct 5677
Query: 361 gtccttcggaggagcagctcgctgggcgaaaaaccaaagaaatcgttgttcggttctttg 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5678 gtc-ttcggaggagcagctcgctgggcgaaaaaccaaagaaatcgttgttcggttctttg 5736
Query: 421 ttcaataggaaaccgctgcaaccgctggagtcccatacaaacgtttcatccacatcatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5737 ttcaataggaaaccgctgcaaccgctggagtcccatacaaacgtttcatccacatcatct 5796
Query: 481 tcggttccagctccggtgacttcttcctcttctgcgtcgggccattctgcgtcgacagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5797 tcggttccagctccggtgacttcttcctcttctgcgtcgggccattctgcgtcgacagca 5856
Query: 541 tcgtcatcgtcctcgccaacgcaggcttcgaccacagctgctccggcttcttcttcttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5857 tcgtcatcgtcctcgccaacgcaggcttcgaccacagctgctccggcttcttcttcttct 5916
Query: 601 tcttcttcttcctccagaggaatacctattcctatcaacatctcgcaatttgcgtctcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5917 tcttcttcttcctccagaggaatacctattcctatcaacatctcgcaatttgcgtctcat 5976
Query: 661 agacaacaaatatcccagttccttaaggaaccaaactctccggaagttaaggatatggcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5977 agacaacaaatatcccagttccttaaggaaccaaactctccggaagttaaggatatggcg 6036
Query: 721 ccaattcaacacgatcgtgtcgtgttgaacaaaaatccaaataaatcgaagcatccactg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6037 ccaattcaacacgatcgtgtcgtgttgaacaaaaatccaaataaatcgaagcatccactg 6096
Query: 781 cctatcaaagaattgaccgagattaatttgaaaagagttacttttgcagtcgatgaattt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6097 cctatcaaagaattgaccgagattaatttgaaaagagttacttttgcagtcgatgaattt 6156
Query: 841 ggtatgg-mcctcctcaacaaattccttcgagaaagccaaaactgggtaac 890
||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6157 ggtatggaccctcctcaacaaattccttcgagaaagccaaaactgggtaac 6207
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8577
Number of Sequences: 1807
Number of extensions: 8577
Number of successful extensions: 620
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)